Information for 4-CGGGAGCCCG (Motif 20)

T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G
Reverse Opposite:
A T G C A T C G T C A G A C T G A G T C A G C T A G T C A G T C G A T C A C T G
p-value:1e-10
log p-value:-2.502e+01
Information Content per bp:1.829
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif254.2
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets45.7 +/- 30.4bp
Average Position of motif in Background51.6 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCCCG
-CGGAGC---
 T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGGGAGCCCG---
---GAGSCCGAGC
 T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCCCG-
-GGGAGGACNG
 T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGGGAGCCCG---
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCCCG
GGGCGGGACC---
 A C G T A C G T A C G T T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGGGAGCCCG
---CAGCC--
 T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCCCG
-NGAAGC---
 T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGGGAGCCCG
GRTGMTRGAGCC--
 A C G T A C G T A C G T A C G T T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGGGAGCCCG-
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T A C G T T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCCCG
GGGCGGGAAGG--
 A C G T A C G T A C G T T G A C C T A G A C T G T C A G C T G A A C T G G T A C A G T C A T G C A T C G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T