Information for 2-CCGCCDGGTGGMGGCA (Motif 2)

T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A
Reverse Opposite:
A G C T A C T G T A G C G T A C A C T G T G A C A G T C G T C A A G T C A G T C G C A T A C T G A T C G T G A C C A T G A T C G
p-value:1e-17
log p-value:-3.960e+01
Information Content per bp:1.670
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif25.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.1 +/- 21.0bp
Average Position of motif in Background51.9 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCDGGTGGMGGCA---
GCCASCAGGGGGCGCYVNNG
 A C G T T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCGCCDGGTGGMGGCA
---CAAGATGGCGGC-
 T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGCCDGGTGGMGGCA
--NNCAGGTGNN----
 T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCGCCDGGTGGMGGCA
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGCCDGGTGGMGGCA
--GACAGGTGTN----
 T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A
A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCGCCDGGTGGMGGCA-
-GCGGAGGTGTCGCCTC
 T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A A C G T
A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCDGGTGGMGGCA-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCGCCDGGTGGMGGCA
--NNCAGGTGCG----
 T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A
A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGCCDGGTGGMGGCA
-TGTCAGGGGGCG---
 T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCGCCDGGTGGMGGCA
---CAAGATGGCGGC-
 T A G C G T A C A C T G A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C T G A T C G A G T C T C G A
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T