Information for 5-CGCCCTGGARCAG (Motif 9)

A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G
Reverse Opposite:
A T G C A G C T A C T G G A C T A C G T T A G C A G T C C G T A A C T G A T C G C T A G G T A C A T C G
p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.777
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif141.0
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets50.1 +/- 23.2bp
Average Position of motif in Background46.8 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGCCCTGGARCAG
---CCAGGAACAG
 A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CGCCCTGGARCAG--
-----TGGAACAGMA
 A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCCCTGGARCAG
TGCCCAGNHW---
 A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGCCCTGGARCAG
GRTGMTRGAGCC-
 A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGCCCTGGARCAG
CCGCCCAAGGGCAG
 A C G T A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCCCTGGARCAG--
NGNTCTAGAACCNGV
 A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0143.1_Klf7_2/Jaspar

Match Rank:7
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------CGCCCTGGARCAG
AAGCATACGCCCAACTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CGCCCTGGARCAG-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCTGGARCAG
CGCCCCCTGACA---
 A C G T A C G T A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGCCCTGGARCAG
-SCCTAGCAACAG
 A T G C A C T G A G T C A T G C A G T C C G A T A C T G A T C G G T C A C T G A A G T C T C G A A T C G
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G