Information for 5-GCTCCCCGCT (Motif 8)

C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T
Reverse Opposite:
T C G A A T C G T A G C C T A G T A C G T A C G T A C G T G C A T A C G G A T C
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.460
Number of Target Sequences with motif226.0
Percentage of Target Sequences with motif26.31%
Number of Background Sequences with motif8202.0
Percentage of Background Sequences with motif17.32%
Average Position of motif in Targets51.7 +/- 25.6bp
Average Position of motif in Background49.8 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTCCCCGCT-
NCTTCCCGCCC
 C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T A C G T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTCCCCGCT-
NNTTCCCGCCC
 C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCGCT----
GACCCCCCGCTGCGC
 A C G T C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T A C G T A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCGCT----
GGCCYCCTGCTGDGH
 A C G T C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T A C G T A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCGCT---
GACCCCCCGCTGTG
 A C G T C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTCCCCGCT
NYTTCCCGCC
 C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCCGCT----
GACCCCCCGCTGTGC
 A C G T C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T A C G T A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTCCCCGCT--
--TTCCCGCCWG
 C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T A C G T A C G T
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCTCCCCGCT
-CCCCCCCC-
 C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T
A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTCCCCGCT
GCTCCG----
 C T A G A T G C A C G T A T G C A T G C A T G C G A T C A T C G T A G C A G C T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T