Information for 1-GCCTYGCCGT (Motif 3)

C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T
Reverse Opposite:
C T G A G T A C A C T G A T C G T G A C T C G A C T G A T C A G A C T G A G T C
p-value:1e-12
log p-value:-2.901e+01
Information Content per bp:1.736
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.01%
Number of Background Sequences with motif620.3
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets43.5 +/- 26.3bp
Average Position of motif in Background48.5 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR2/MA0472.2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCTYGCCGT
TGCGTGGGCGT
 A C G T C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

EGR3/MA0732.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCTYGCCGT--
ANTGCGTGGGCGTNN
 A C G T A C G T A C G T C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCTYGCCGT--
---TTGCGGTTT
 C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

EGR4/MA0733.1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCCTYGCCGT--
AANTGCGTGGGCGTNN
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCTYGCCGT
AGGCCTAG----
 A C G T A C G T C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCTYGCCGT--
--TTTGCGGTTT
 C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T A C G T A C G T
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCTYGCCGT
AGGCCTNG----
 A C G T A C G T C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCTYGCCGT
CCTTTGAWGT
 C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCCTYGCCGT---
---TGGCAGTTGG
 C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCTYGCCGT------
NNNTGGCAGTTGGTNN
 C T A G A G T C A G T C A G C T A G C T A C T G A T G C T G A C A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G