Information for 10-CGCGGCTTTTTGC (Motif 19)

A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C
Reverse Opposite:
T A C G A T G C C T G A T C G A T C G A T C G A T G C A T A C G T G A C G T A C T A C G T A G C T A C G
p-value:1e-7
log p-value:-1.775e+01
Information Content per bp:1.548
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif15.83%
Number of Background Sequences with motif4631.7
Percentage of Background Sequences with motif9.78%
Average Position of motif in Targets45.5 +/- 25.5bp
Average Position of motif in Background49.7 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGCTTTTTGC
GGNGCGNCTGTTNNN
 A C G T A C G T A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC-----
---ANATTTTTGCAANTN
 A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCGGCTTTTTGC---
CTTGGCANNNTGCCAA
 A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C A C G T A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC--
-TTGGCATGGTGCCA
 A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C A C G T A C G T
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC
---NGCTN-----
 A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC-
--CAGCTGTTTCCT
 A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C A C G T
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC---
--TGGCAGNCTGCCAG
 A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C A C G T A C G T A C G T
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTTTGC
ANCGCGCGCCCTTNN--
 A C G T A C G T A C G T A C G T A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTTTGC
NTCGCGCGCCTTNNN--
 A C G T A C G T A C G T A C G T A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGCGGCTTTTTGC-
----YCTTTGTTCC
 A T G C A T C G A T G C C A T G A C T G A T G C A C G T A G C T A G C T A G C T A G C T T A C G A T G C A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C