Information for 17-CCTCCCTGCGGGA (Motif 18)

A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C T G A T G C G T C A A C T G A C T G A C T G C G T A A T C G A C T G
p-value:1e-5
log p-value:-1.352e+01
Information Content per bp:1.934
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.3 +/- 4.8bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTCCCTGCGGGA--
NTCCCCTCAGGGANT
 A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTCCCTGCGGGA-
CCCCCCCGGGGGNN
 A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCCTGCGGGA-
ACCCCCCCGGGGGGN
 A C G T A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCCTGCGGGA-
NCCCCCCCGGGGGGN
 A C G T A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CCTCCCTGCGGGA---
------GGCGGGAARN
 A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCTCCCTGCGGGA-
----CWGGCGGGAA
 A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T
A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTCCCTGCGGGA--
ATTGCCTGAGGCGAA
 A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCTCCCTGCGGGA---
-----GGGCGGGAAGG
 A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTCCCTGCGGGA----
--DCHCAGCAGGRGGCC
 A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCTCCCTGCGGGA--
---SCCTSAGGSCAW
 A G T C A T G C A C G T A G T C A G T C A G T C A C G T A T C G G T A C A C T G A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T