Information for 14-CGTGACACGT (Motif 16)

A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C G T C T A G C G A T A G T C C G T A A G T C A T C G
p-value:1e-7
log p-value:-1.718e+01
Information Content per bp:1.862
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif23.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets64.3 +/- 29.1bp
Average Position of motif in Background59.1 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes2/MA0616.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGTGACACGT--
TAACGACACGTGC
 A C G T A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T A C G T A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

HEY2/MA0649.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CGTGACACGT---
---GACACGTGCC
 A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGTGACACGT-
---GHCACGTG
 A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T A C G T
A C G T A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G

Creb3l2/MA0608.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGTGACACGT--
---GCCACGTGT
 A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGTGACACGT
NCGTGACN---
 A C G T A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGTGACACGT-----
-GTGCCACGTCATCA
 A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CGTGACACGT-
---GNCACGTG
 A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T A C G T
A C G T A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGTGACACGT---
---NACACGTGCN
 A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CGTGACACGT---
---GACACGTGCC
 A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CGTGACACGT--
----ACACGTGC
 A T G C A C T G G A C T A C T G C G T A A G T C C G T A G T A C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C