Information for 16-HRHTCTCGCGAGA (Motif 13)

G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A
Reverse Opposite:
C G A T A T G C A C G T A G T C A C T G A T G C A C T G C T G A T A C G T G C A C A G T G A T C C A G T
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.663
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif79.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets52.6 +/- 22.5bp
Average Position of motif in Background50.3 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:1
Orientation:forward strand
Alignment:HRHTCTCGCGAGA
-ATTCTCGCGAGA
 G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A
A C G T T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-HRHTCTCGCGAGA-
NAGNTCTCGCGAGAN
 A C G T G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:HRHTCTCGCGAGA---
-GTTCTCGCGAGANCC
 G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A A C G T A C G T A C G T
A C G T T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

ZBED1/MA0749.1/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:forward strand
Alignment:HRHTCTCGCGAGA--
--CTATCGCGACATA
 G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A A C G T A C G T
A C G T A C G T G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:HRHTCTCGCGAGA-
----GGCACGTGCC
 G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A A C G T
A C G T A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:HRHTCTCGCGAGA-
--TTTTCGCGCGAA
 G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A A C G T
A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:HRHTCTCGCGAGA----
-----TGGCGGGAAAHB
 G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:6
Orientation:forward strand
Alignment:HRHTCTCGCGAGA---
------GGCGGGAAAH
 G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:6
Orientation:forward strand
Alignment:HRHTCTCGCGAGA---
------GGCGGGAARN
 G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:HRHTCTCGCGAGA---
-----GGGCGGGAAGG
 G T C A C T A G G T C A A C G T A T G C G A C T A G T C A T C G A G T C A C T G G T C A T A C G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G