Information for 6-CTGGGCCTGACGCTCW (Motif 8)

A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
Reverse Opposite:
C G A T A C T G G T C A A T C G A G T C A T C G A C G T A G T C C G T A T C A G C T A G A G T C G T A C A G T C C G T A A T C G
p-value:1e-11
log p-value:-2.689e+01
Information Content per bp:1.766
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 20.5bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTGGGCCTGACGCTCW
----GSCTGTCACTCA
 A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCCTGACGCTCW
GCTGACCTTGAACTN--
 A C G T A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTGGGCCTGACGCTCW
GGGGCCGAGGCCTG-------
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGGGCCTGACGCTCW
CTGTTCCTGG------
 A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGGGCCTGACGCTCW
---TGCCTGAGGCN--
 A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGGGCCTGACGCTCW
-TGACCTTGAN-----
 A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCCTGACGCTCW
WDNCTGGGCA---------
 A C G T A C G T A C G T A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTGGGCCTGACGCTCW
---NGCCTGAGGCN--
 A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-10
Orientation:forward strand
Alignment:----------CTGGGCCTGACGCTCW
GAGCCTGGTACTGWGCCTGR------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGGGCCTGACGCTCW
-TGACCTTGAV-----
 A T G C A C G T A C T G A C T G T C A G A G T C A G T C A C G T T C A G C G T A T A G C T C A G A T G C A C G T A G T C G C A T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T