Information for 5-AMCAWASSKCAKGTWK (Motif 7)

C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G
Reverse Opposite:
T G A C C G A T G T C A A G T C G T A C A C G T A C T G G T C A A T C G A T G C A C G T C G A T A C G T A C T G A C T G A C G T
p-value:1e-11
log p-value:-2.689e+01
Information Content per bp:1.802
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 28.3bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AMCAWASSKCAKGTWK
--CAAAGGTCAG----
 C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AMCAWASSKCAKGTWK
TCTCAAAGGTCACCTG-
 A C G T C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AMCAWASSKCAKGTWK
TCTCAAAGGTCACGAG-
 A C G T C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AMCAWASSKCAKGTWK
AGAGTCCAAAGTCCA-----
 A C G T A C G T A C G T A C G T C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.56
Offset:8
Orientation:forward strand
Alignment:AMCAWASSKCAKGTWK--
--------VCAGGTRDRY
 C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AMCAWASSKCAKGTWK
CANAGNNCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AMCAWASSKCAKGTWK
-------AACAGGTGT
 C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AMCAWASSKCAKGTWK
AACATATGTC------
 C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AMCAWASSKCAKGTWK--
--------GCACGTACCC
 C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AMCAWASSKCAKGTWK
ANGNAAAGGTCA-----
 A C G T C G T A T G A C A G T C C G T A G C T A C G T A A T C G A T G C A C G T A G T C C G T A A C T G C T A G A C G T C G T A A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T