Information for 9-TTTGGTAGCCCTC (Motif 27)

A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C
Reverse Opposite:
A C T G C G T A A C T G C T A G C T A G A G T C G A C T C G T A T G A C A G T C G C T A T C G A T C G A
p-value:1e-7
log p-value:-1.638e+01
Information Content per bp:1.681
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif80.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets54.4 +/- 29.1bp
Average Position of motif in Background49.7 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGTAGCCCTC---
NNNNGGTACCCCCCANN
 A C G T A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCCCTC
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTTGGTAGCCCTC--
-----AASCACTCAA
 A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGTAGCCCTC-
GYCTGGYYTNTGTCA
 A C G T A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TTTGGTAGCCCTC---
-----AGCCACTCAAG
 A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGTAGCCCTC
NNTTGGCANN----
 A C G T A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTTGGTAGCCCTC
-TTGGCA------
 A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTGGTAGCCCTC
CTTGGCAA-----
 A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTTGGTAGCCCTC
---GGAAATCCCC
 A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCCCTC
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A G C T A C G T C A G T C T A G A C T G C G A T C G T A T C A G A G T C G A T C G T A C C G A T T A G C
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T