Information for 8-WGKTCATTTRWTT (Motif 25)

C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T A G C T C G T A T C G A C G T A A C G T A C T G C G T A G T A C A G T C C G A T
p-value:1e-7
log p-value:-1.810e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 23.9bp
Average Position of motif in Background51.0 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-WGKTCATTTRWTT-
NANTTCATTGAATTA
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:WGKTCATTTRWTT-
---TAATTAAATTA
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--WGKTCATTTRWTT-
GGAGGTCATTAATTAT
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:WGKTCATTTRWTT-
---TAATTTAATTA
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:WGKTCATTTRWTT-
---TAATTAAATTA
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

DUX4/MA0468.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:WGKTCATTTRWTT-
---TGATTAAATTA
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:WGKTCATTTRWTT--
---TAATYNRATTAR
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:WGKTCATTTRWTT
------TTTAAT-
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:WGKTCATTTRWTT
--GTCATN-----
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:WGKTCATTTRWTT
AGGTCA-------
 C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T C T G A C G T A A C G T A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T