Information for 13-AWGSACMAGSYCTGTR (Motif 19)

G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
Reverse Opposite:
A G T C C G T A A G T C C G T A A C T G C T G A A T C G A G T C A C G T A C T G C T A G C G A T A T G C A G T C C G T A C A G T
p-value:1e-9
log p-value:-2.086e+01
Information Content per bp:1.838
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 24.7bp
Average Position of motif in Background82.4 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AWGSACMAGSYCTGTR
NNAGGGACAAGGGCNC--
 A C G T A C G T G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AWGSACMAGSYCTGTR
-----CNAGGCCT---
 G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.55
Offset:10
Orientation:forward strand
Alignment:AWGSACMAGSYCTGTR
----------GCTGTG
 G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AWGSACMAGSYCTGTR
-----CTAGGCCT---
 G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AWGSACMAGSYCTGTR
AAGTTCAAGGTCAGC-
 G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AWGSACMAGSYCTGTR
GGGGCCGAGGCCTG--
 G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AWGSACMAGSYCTGTR
-AGGTCAAGGTCA---
 G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.47
Offset:1
Orientation:forward strand
Alignment:AWGSACMAGSYCTGTR
-AGGTCAAGGTCA---
 G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.47
Offset:3
Orientation:forward strand
Alignment:AWGSACMAGSYCTGTR
---NTCAAGGTCA---
 G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.47
Offset:7
Orientation:forward strand
Alignment:AWGSACMAGSYCTGTR---
-------AGGTCTCTAACC
 G C T A C G A T A C T G A T C G C G T A A G T C G T A C C G T A A C T G A T G C A G C T A G T C A C G T A C T G A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C