Information for 9-MCTTCTSTTCAGGTCT (Motif 12)

G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A A T G C G T A C A C G T A C T G G T C A C T G A A T G C C G T A T A C G C G T A C T G A A T C G A C G T
p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.793
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.8 +/- 10.6bp
Average Position of motif in Background53.8 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:MCTTCTSTTCAGGTCT
-CTTATCTCHMCATCT
 G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
A C G T A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----MCTTCTSTTCAGGTCT
TTTTTTTTTTTTTTCAGGTT-
 A C G T A C G T A C G T A C G T A C G T G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----MCTTCTSTTCAGGTCT
TTTTTTTTTTTTTTCAGGTT-
 A C G T A C G T A C G T A C G T A C G T G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-MCTTCTSTTCAGGTCT
CCATTGTATGCAAAT--
 A C G T G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:MCTTCTSTTCAGGTCT
GTTTCACTTCCG----
 G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--MCTTCTSTTCAGGTCT
NNNNTTGTGTGCTTNN--
 A C G T A C G T G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:MCTTCTSTTCAGGTCT
------CTTCCGGT--
 G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T A C G T

PB0020.1_Gabpa_1/Jaspar

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:MCTTCTSTTCAGGTCT--
-NNNNACTTCCGGTATNN
 G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T A C G T A C G T
A C G T A C G T C G A T C T G A G T A C C T G A A G T C C G A T C G A T A G T C A G T C A C T G A T C G G A C T C G T A C G A T A C G T C A T G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:MCTTCTSTTCAGGTCT
--------CNAGGCCT
 G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ELK1/MA0028.2/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:MCTTCTSTTCAGGTCT
----NACTTCCGGT--
 G T C A A T G C A G C T C G A T A G T C C G A T A T C G A G C T C A G T A G T C C G T A C A T G T A C G C G A T A T G C A C G T
A C G T A C G T A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T A C G T A C G T