Information for 1-GARATGTMYTGTGTGT (Motif 1)

A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A A T G C C G T A A G T C G C T A C T A G A C G T C T G A A G T C G T C A A G C T A G T C A C G T T A G C
p-value:1e-15
log p-value:-3.493e+01
Information Content per bp:1.724
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 27.8bp
Average Position of motif in Background38.3 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GARATGTMYTGTGTGT----
----NNNNTTGTGTGCTTNN
 A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GARATGTMYTGTGTGT----
----NNGCGTGTGTGCNGCN
 A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

ZNF143/MA0088.2/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GARATGTMYTGTGTGT-
-CAATGCATTGTGGGTA
 A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T A C G T
A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GARATGTMYTGTGTGT--
-------CTTGAGTGGCT
 A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GARATGTMYTGTGTGT--
--------TTRAGTGSYK
 A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GARATGTMYTGTGTGT
TCTCAAAGGTCACGAG---
 A C G T A C G T A C G T A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.49
Offset:9
Orientation:forward strand
Alignment:GARATGTMYTGTGTGT
---------TGCGTG-
 A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----GARATGTMYTGTGTGT
CATCCAGATGTTC-------
 A C G T A C G T A C G T A C G T A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:GARATGTMYTGTGTGT--
--------TTGAGTGSTT
 A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GARATGTMYTGTGTGT
ANGNAAAGGTCA-------
 A C G T A C G T A C G T A T C G C G T A C T A G C T G A A C G T A C T G A G C T G T C A A G T C C A G T T A C G C G A T A T C G A C G T A C T G A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T