Information for 20-CCACAAATGG (Motif 36)

A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G A T A C G T A C G T A C T G A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.957
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.4 +/- 19.9bp
Average Position of motif in Background34.3 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CCACAAATGG
CCATATATGG
 A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CCACAAATGG
NWAACCACADNN--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCACAAATGG--
CCATATATGGNA
 A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCACAAATGG-
-NACATATGGN
 A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G A C G T
A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

PB0078.1_Srf_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCACAAATGG--
TTCCATATATGGAA
 A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G A C G T A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCACAAATGG
--ACATATGG
 A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCACAAATGG-
KCCAAAAATAGC
 A C G T A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCACAAATGG
RNAACAATGG-
 A C G T A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAATGG
AAACCACAGAN--
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCACAAATGG
AAACCGCAAA---
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T