p-value: | 1e-10 |
log p-value: | -2.517e+01 |
Information Content per bp: | 1.687 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.86% |
Number of Background Sequences with motif | 3.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 42.3 +/- 22.5bp |
Average Position of motif in Background | 59.0 +/- 25.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 1 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CAGTMAGCCAGGCTGA GSCTGTCACTCA------ |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAGTMAGCCAGGCTGA TGGCAGNCTGCCAG----- |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CAGTMAGCCAGGCTGA NCTGTCAATCAN----- |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 4 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CAGTMAGCCAGGCTGA SCTGTCAVTCAV----- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGTMAGCCAGGCTGA SCAGYCADGCATGAC-- |
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MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGTMAGCCAGGCTGA TGAGTCAGCA------- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CAGTMAGCCAGGCTGA AGGTGNCAGACAG----- |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 8 |
Score: | 0.50 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGTMAGCCAGGCTGA VBTGWCAGCB------- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.48 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CAGTMAGCCAGGCTGA AGGTGHCAGACA------ |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 10 |
Score: | 0.48 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAGTMAGCCAGGCTGA NTGTCAN--------- |
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