Information for 10-GGTTGTGCCACAA (Motif 13)

T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
Reverse Opposite:
A G C T G C A T T A C G A C G T A C T G A T C G A T G C C G T A T A G C G T C A T C G A A G T C A G T C
p-value:1e-11
log p-value:-2.744e+01
Information Content per bp:1.664
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif157.5
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets44.8 +/- 24.8bp
Average Position of motif in Background51.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGTTGTGCCACAA
---CGTGCCAAG-
 T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGTTGTGCCACAA
---GGTGCCAAGT
 T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GGTTGTGCCACAA
-----TGCCAA--
 T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGTTGTGCCACAA
----TTGCCAAG-
 T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGTTGTGCCACAA
----ATGCCAACC
 T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTTGTGCCACAA
NATTGTGCAAT--
 T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGTTGTGCCACAA---
GGGTGTGCCCAAAAGG
 T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGTGCCACAA
TGGGTGTGGC----
 A C G T T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGTTGTGCCACAA
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGTTGTGCCACAA
NTGGGTGTGGCC---
 A C G T A C G T T C A G T C A G A G C T C A G T A T C G C G A T A T C G A T G C T G A C C G T A A T G C C G T A T C G A
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T