Information for 5-YNHAACCACA (Motif 5)

G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C T A G A C T G A C G T C G A T C G A T G T C A C T G A
p-value:1e-22
log p-value:-5.137e+01
Information Content per bp:1.721
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif911.5
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets55.0 +/- 24.8bp
Average Position of motif in Background51.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.95
Offset:1
Orientation:forward strand
Alignment:YNHAACCACA---
-NWAACCACADNN
 G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.94
Offset:2
Orientation:forward strand
Alignment:YNHAACCACA--
--AAACCACANN
 G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.94
Offset:1
Orientation:forward strand
Alignment:YNHAACCACA-
-NAAACCACAG
 G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:YNHAACCACA--
--AAACCACAGC
 G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:YNHAACCACA---
--AAACCACAGAN
 G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.83
Offset:2
Orientation:forward strand
Alignment:YNHAACCACA--
--AAACCGCAAA
 G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.82
Offset:2
Orientation:forward strand
Alignment:YNHAACCACA-
--AAACCGCAA
 G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.71
Offset:3
Orientation:forward strand
Alignment:YNHAACCACA
---ATCCAC-
 G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-YNHAACCACA
TCCAATCCACA
 A C G T G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:YNHAACCACA---
-GCGACCACACTG
 G A C T C A G T G C T A C G T A T G C A A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G