Information for 3-GAGGTCAGAGGTC (Motif 3)

C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C
Reverse Opposite:
A T C G T G C A T G A C A G T C A G C T A G T C C G A T T A C G T G C A A G T C A T G C A G C T G A T C
p-value:1e-31
log p-value:-7.237e+01
Information Content per bp:1.700
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.80%
Number of Background Sequences with motif148.0
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets57.6 +/- 20.6bp
Average Position of motif in Background49.5 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-GAGGTCAGAGGTC-
AGGGGTCAGAGGTCA
 A C G T C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GAGGTCAGAGGTC-
GAGGTCAAAGGTCA
 C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GAGGTCAGAGGTC-
GAGGTCAAAGGTCA
 C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:4
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GAGGTCAGAGGTC-
GGGGTCAAAGGTCA
 C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GAGGTCAGAGGTC-
GGGGTCAAAGGTCA
 C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GAGGTCAGAGGTC-
GGGGTCAAAGGTCA
 C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GAGGTCAGAGGTC-
TAGGGCAAAGGTCA
 C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GAGGTCAGAGGTC---
AAAGGTCAAAGGTCAAC
 A C G T C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GAGGTCAGAGGTC-
GTAGGGCAAAGGTCA
 A C G T C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GAGGTCAGAGGTC-
TGGGGCAAAGGTCA
 C T A G C T G A A T C G C T A G A C G T A T G C G C T A T C A G C T G A T C A G A C T G A C G T A T G C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A