Information for 15-TTTGTAGTGG (Motif 20)

C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G
Reverse Opposite:
A G T C A T G C C G T A A G T C A C G T C G T A A G T C G T C A C G T A C G T A
p-value:1e-4
log p-value:-1.114e+01
Information Content per bp:1.862
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.0 +/- 18.7bp
Average Position of motif in Background42.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTAGTGG--
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTAGTGG----
AAATTCAAGTGGNTTN
 A C G T A C G T C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTAGTGG----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTAGTGG----
AATTTCAAGTGGCTTN
 A C G T A C G T C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTAGTGG
TCTATTTATAGN--
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTAGTGG---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTAGTGG
GCTATTTATAGC--
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTTGTAGTGG
-NTCAAGTGG
 C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTAGTGG----
AANTTCAAGTGGCTTN
 A C G T A C G T C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G A C G T A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTAGTGG
GGGAATTGTAGT--
 A C G T A C G T A C G T A C G T C G A T A C G T A C G T C T A G A C G T C G T A A C T G A C G T A T C G A C T G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T