Information for 21-GTGCACTAGTGAC (Motif 19)

C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G A G T C G T C A A G T C
p-value:1e-5
log p-value:-1.207e+01
Information Content per bp:1.929
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.4 +/- 15.8bp
Average Position of motif in Background46.4 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGCACTAGTGAC----
-TGACCCAGTGACCTAC
 C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTGCACTAGTGAC-
----ACTAGTTAAC
 C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C A C G T
A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTGCACTAGTGAC
NNGTATGTGCACATNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTGCACTAGTGAC
NTNTATGTGCACATNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGCACTAGTGAC----
GAAAACTAGTTAACATC
 C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GTGCACTAGTGAC
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GTGCACTAGTGAC-
----NCACGTGACN
 C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GTGCACTAGTGAC
---RTCATGTGAC
 C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C
A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTGCACTAGTGAC---
-TGACCTTTTGACCTC
 C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C A C G T A C G T A C G T
A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

HOXA5/MA0158.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTGCACTAGTGAC
---CACTAATT--
 C T A G A C G T A C T G A G T C G T C A A G T C A C G T C G T A A C T G A C G T A C T G G T C A A G T C
A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T A C G T