Information for 6-ACACGABCATGCA (Motif 9)

C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C G T C T A G T A C G A C G T G A T C C A T G A C G T A T C G A C G T
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.810
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 27.8bp
Average Position of motif in Background25.5 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACACGABCATGCA------
--TNNATTATGCATANNTT
 C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACACGABCATGCA-
----GHATATKCAT
 C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACACGABCATGCA-
----GAATATTCAT
 C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ACACGABCATGCA------
------ATATGCAAATNNN
 C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACACGABCATGCA-
CTCATGAATATTCAT
 A C G T C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:ACACGABCATGCA---
------TTATGCAAAT
 C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACACGABCATGCA----
-----AATATGCAAATT
 C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:ACACGABCATGCA--
-----MTGATGCAAT
 C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACACGABCATGCA--
AYATGYATATGCATR
 C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ACACGABCATGCA-------
----TTGTATGCAAATTAGA
 C G T A A T G C C G T A G T A C C A T G C G T A A C G T A G T C C G T A A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A