Information for 2-CAGTAGTCAC (Motif 8)

A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C
Reverse Opposite:
C T A G G A C T A C T G T G C A A G T C G A C T G T C A T G A C C G A T T C A G
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.692
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif9.14%
Number of Background Sequences with motif1359.5
Percentage of Background Sequences with motif3.02%
Average Position of motif in Targets52.4 +/- 24.4bp
Average Position of motif in Background50.6 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CAGTAGTCAC--
----AGTCACGC
 A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAGTAGTCAC---
NNAATTAGTCACGGT
 A C G T A C G T A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C A C G T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAGTAGTCAC----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CAGTAGTCAC-----
-----GTCACATGAY
 A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAGTAGTCAC---
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CAGTAGTCAC-----
----GGTCACATGAC
 A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAGTAGTCAC-----
----GGTCACGTGGC
 A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

JUND/MA0491.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGTAGTCAC-
NATGAGTCACN
 A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C A C G T
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

FOSL1/MA0477.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGTAGTCAC-
NATGAGTCACC
 A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C A C G T
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGTAGTCAC
-AGRGGTCA-
 A G T C G C T A A C T G C A G T C T G A C T A G A C G T T G A C C T G A A G T C
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T