Information for 5-CACTGTGTACWCA (Motif 6)

A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A
Reverse Opposite:
C A G T A C T G C G T A A C T G G C A T C G T A A G T C C G T A A G T C C G T A C T A G C A G T A C T G
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 15.3bp
Average Position of motif in Background56.6 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CACTGTGTACWCA-----
-NSTGTTTRCWCAGBNNN
 A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CACTGTGTACWCA----
NTNTATGTGCACATNNN
 A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Ar/MA0007.3/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CACTGTGTACWCA
NGGTACACNGTGTTCCC-
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CACTGTGTACWCA
GGGAACATTGTGTTCCC-
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CACTGTGTACWCA
--CTGTTTAC---
 A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A
A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CACTGTGTACWCA
NGGAACATNATGTACCC-
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CACTGTGTACWCA
-CNTGTTTACATA
 A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A
A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACTGTGTACWCA
-GCTGTG------
 A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CACTGTGTACWCA
-TNTGTTTACTT-
 A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A
A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACTGTGTACWCA-
TCCATGTTTACTTTG
 A C G T A G T C G C T A A G T C A C G T A C T G A C G T A C T G A C G T C G T A A G T C C G A T A G T C G C T A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G