Information for 4-GCAGAGGGCGTGC (Motif 5)

C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C
Reverse Opposite:
C A T G G T A C C T G A A G T C A C T G T A G C G A T C G T A C C G A T A T G C C G A T A T C G G T A C
p-value:1e-12
log p-value:-2.799e+01
Information Content per bp:1.669
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif85.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets40.8 +/- 22.4bp
Average Position of motif in Background47.4 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GCAGAGGGCGTGC
---GAGSCCGAGC
 C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCAGAGGGCGTGC--
NNNAAGGGGGCGGGNNN
 A C G T A C G T C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCAGAGGGCGTGC
-----GGACGTGC
 C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

KLF14/MA0740.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAGAGGGCGTGC--
-AAGGGGGCGTGGCC
 C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C A C G T A C G T
A C G T C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCAGAGGGCGTGC---
-ATAAGGGCGCGCGAT
 C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C A C G T A C G T A C G T
A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCAGAGGGCGTGC--
-----TTGCGTGCVA
 C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCAGAGGGCGTGC-
--AGTGGGCGTGGC
 C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C A C G T
A C G T A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAGAGGGCGTGC-
TCAGNGAGCGTGAC
 C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCAGAGGGCGTGC-
--RGKGGGCGKGGC
 C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C A C G T
A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCAGAGGGCGTGC---
-ATAAAGGCGCGCGAT
 C A T G A T G C C G T A A T C G G C T A A C T G C T A G A T C G A G T C A C T G G A C T C A T G G A T C A C G T A C G T A C G T
A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T