Information for 9-TCATCCTGGCGGACTG (Motif 24)

A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A C G T A T G C A T G C A C T G G T A C G T A C C G T A A C T G A T C G C G T A A C G T A T C G C G T A
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.902
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 28.8bp
Average Position of motif in Background58.3 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCATCCTGGCGGACTG
---TAATGGCGGNC--
 A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCATCCTGGCGGACTG
GTCATN-----------
 A C G T A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.50
Offset:5
Orientation:forward strand
Alignment:TCATCCTGGCGGACTG---
-----CTGGCAGNCTGCCA
 A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCATCCTGGCGGACTG
-CAAGATGGCGGC---
 A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TCATCCTGGCGGACTG
ACATCCTGNT------
 A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----TCATCCTGGCGGACTG
GATAACATCCTAGTAG----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--TCATCCTGGCGGACTG
NNTAATCCNGNCNN----
 A C G T A C G T A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TCATCCTGGCGGACTG
TTAATCCT---------
 A C G T A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.47
Offset:2
Orientation:forward strand
Alignment:TCATCCTGGCGGACTG-
--GTCATGCHTGRCTGS
 A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TCATCCTGGCGGACTG
ATAATCCC---------
 A C G T A C G T A T G C C G T A A C G T A T G C A G T C A C G T A C T G A C T G A G T C A T C G A T C G C G T A G T A C A C G T A T C G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T