Information for 11-TGCGAKGCTTGTT (Motif 17)

A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T
Reverse Opposite:
G C T A C G T A A G T C T C G A C T G A A C T G A G T C G T A C A C G T G T A C T A C G A G T C C G T A
p-value:1e-10
log p-value:-2.315e+01
Information Content per bp:1.719
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.7 +/- 17.3bp
Average Position of motif in Background44.0 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGCGAKGCTTGTT
-----TGCGTG--
 A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCGAKGCTTGTT
--CNAGGCCT---
 A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGCGAKGCTTGTT
----AAGCTTG--
 A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGCGAKGCTTGTT
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGCGAKGCTTGTT
--CTAGGCCT---
 A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCGAKGCTTGTT-
----TTGCGTGCVA
 A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TGCGAKGCTTGTT-
---AAGGCAAGTGT
 A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGCGAKGCTTGTT
NNGCNCTGCGCGGC
 A C G T A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGCGAKGCTTGTT
-----GGCGCGCT
 A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TGCGAKGCTTGTT---
-CAAAGGCGTGGCCAG
 A C G T A C T G A G T C C A T G G T C A A C T G A C T G A G T C A G C T A G C T A C T G A C G T C G A T A C G T A C G T A C G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G