Information for 8-TGCMCGYKCTGCT (Motif 12)

A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T
Reverse Opposite:
G T C A A T C G A T G C C T G A C T A G G T A C C T A G G T A C A C T G A C T G A C T G G T A C C G T A
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.757
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif41.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets49.7 +/- 16.9bp
Average Position of motif in Background47.0 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGCMCGYKCTGCT---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TGCMCGYKCTGCT--
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGCMCGYKCTGCT
GGCACGTGCC---
 A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TGCMCGYKCTGCT-
----CCTGCTGAGH
 A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL001.1_MTE/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGCMCGYKCTGCT-----
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:TGCMCGYKCTGCT-
---------NGCTN
 A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TGCMCGYKCTGCT
NNTTCCCGCCC----
 A C G T A C G T A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TGCMCGYKCTGCT---
----CCCCCTGCTGTG
 A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TGCMCGYKCTGCT
ATGCCCACC-----
 A C G T A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TGCMCGYKCTGCT
DTTTCCCGCC-----
 A C G T A C G T A C G T A C T G T G A C G T A C G T A C A C T G G A T C A C T G A G T C A G C T A T C G A T G C A C G T
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T