Information for 3-CTAGTGGACA (Motif 11)

A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A
Reverse Opposite:
C A G T T A C G A C G T G A T C G A T C G T C A A G T C A G C T G C T A T A C G
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.662
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif8.26%
Number of Background Sequences with motif1165.4
Percentage of Background Sequences with motif2.59%
Average Position of motif in Targets43.5 +/- 25.4bp
Average Position of motif in Background49.0 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTAGTGGACA
---GTGGAT-
 A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:-10
Orientation:forward strand
Alignment:----------CTAGTGGACA
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.62
Offset:-9
Orientation:reverse strand
Alignment:---------CTAGTGGACA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTAGTGGACA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTAGTGGACA--
--AATGGAAAAT
 A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A A C G T A C G T
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CTAGTGGACA-
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTAGTGGACA
NTCAAGTGG---
 A C G T A C G T A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTAGTGGACA---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTAGTGGACA
NTCAAGTGGN--
 A C G T A C G T A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTAGTGGACA--
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A C G T A T G C C G A T T C G A T C A G C A G T C T A G C T A G T G C A A T G C G T C A A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G