Information for 5-SGCRGCCATCTTC (Motif 4)

A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C
Reverse Opposite:
C T A G C G T A C T G A A T C G C G T A A C G T A C T G A C T G T A G C A G C T C T A G A G T C A T G C
p-value:1e-12
log p-value:-2.787e+01
Information Content per bp:1.718
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif40.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets57.6 +/- 21.9bp
Average Position of motif in Background55.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:SGCRGCCATCTTC
-GCNGCCATCTTG
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:SGCRGCCATCTTC
-GCCGCCATCTTG
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.63
Offset:8
Orientation:forward strand
Alignment:SGCRGCCATCTTC-
--------GCTTCC
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

POL005.1_DPE/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:SGCRGCCATCTTC
----NACATCTTN
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C
A C G T A C G T A C G T A C G T C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:SGCRGCCATCTTC--------
-----CCGTCTTCCCCCTCAC
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:SGCRGCCATCTTC-
----GCCATCTGTT
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:SGCRGCCATCTTC----
CCNNACCATCTGGCCTN
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:SGCRGCCATCTTC----
---------CTTCCGGT
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:SGCRGCCATCTTC
GTCCGCCATTA--
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:SGCRGCCATCTTC
-----ACGTCATC
 A T C G C T A G A G T C T C G A A C T G G T A C A G T C T C G A C G A T A T G C A G C T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C