Information for 15-TGGAATDNRGCAATGG (Motif 30)

C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
Reverse Opposite:
G T A C A G T C C G T A C G A T A C G T A C T G A G T C G A T C G C T A G C T A G C T A A G C T C G A T G A T C G T A C G T C A
p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.620
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif203.1
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets54.9 +/- 22.3bp
Average Position of motif in Background50.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGGAATDNRGCAATGG
---NATTGTGCAAT--
 C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGGAATDNRGCAATGG
------VRAACAATGG
 C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TGGAATDNRGCAATGG
--------AACAAAGG
 C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGGAATDNRGCAATGG-
-------GAACAATGGN
 C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

CEBPD/MA0836.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGAATDNRGCAATGG
----ATTGCGCAAT--
 C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGAATDNRGCAATGG
----ATTGCGCAAT--
 C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
A C G T A C G T A C G T A C G T T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGGAATDNRGCAATGG
---NATGTTGCAA---
 C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGAATDNRGCAATGG
TTGGCANNNTGCCAAG-
 A C G T C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGGAATDNRGCAATGG
-----TTATGCAAT--
 C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TGGAATDNRGCAATGG
-------GAACAATGG
 C A G T A C T G C T A G G C T A T C G A C G A T C G A T C A G T C T A G A C T G T G A C G T C A G C T A G C A T A C T G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G