Information for 13-AGGGGCTGAGGWGAAA (Motif 27)

C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
Reverse Opposite:
G C A T A G C T A G C T A G T C G C A T A T G C A G T C G C A T G A T C C G T A A C T G A G T C G A T C G A T C G T A C A G C T
p-value:1e-7
log p-value:-1.762e+01
Information Content per bp:1.698
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif80.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets50.6 +/- 22.5bp
Average Position of motif in Background49.9 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGGGGCTGAGGWGAAA
TGGGGCAAAGGTCA--
 C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCTGAGGWGAAA
NNTNNGGGGCGGNGNGN---
 A C G T A C G T A C G T A C G T C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGGGGCTGAGGWGAAA
----GCTGTGGTTT--
 C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGGGGCTGAGGWGAAA
----GCTGTG------
 C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AGGGGCTGAGGWGAAA
------GGAGGGGGAA
 C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.49
Offset:8
Orientation:forward strand
Alignment:AGGGGCTGAGGWGAAA
--------AGGTGTCA
 C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGGGGCTGAGGWGAAA
AGGGGTCAGAGGTCA--
 A C G T C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGGGGCTGAGGWGAAA
ATTGCCTGAGGCAAT-
 C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGGGGCTGAGGWGAAA
TAGGGCAAAGGTCA--
 C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGGGGCTGAGGWGAAA
AGGGGGCGGGGCTG---
 A C G T C T G A C A T G C T A G C T A G C T A G A G T C G A C T C A T G C G T A A C T G A T C G C G T A C T A G T C G A T C G A C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T