Information for 12-GAGTCAATACAAAAAG (Motif 22)

A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C G T A G C T A C T G A G C T C G T A A C G T A C G T A C T G C G T A A G T C A C G T A G T C
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.921
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.8 +/- 24.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGTCAATACAAAAAG
ATATCAAAACAAAACA
 A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGTCAATACAAAAAG-
-TGCCAAAATAAACANN
 A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAGTCAATACAAAAAG---
--GTTAAAAAAAAAAATTA
 A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGTCAATACAAAAAG
BAGTCATANTGAAAG-
 A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGTCAATACAAAAAG-
CATACAATACGAAATAA
 A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGTCAATACAAAAAG-
-AATCAATTCAATAATT
 A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G A C G T
A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GAGTCAATACAAAAAG----
----AAACAGACAAAGGAAT
 A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCAATACAAAAAG-
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAGTCAATACAAAAAG--
---AACAAACAACAAGAG
 A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAGTCAATACAAAAAG
TGAGTCA----------
 A C G T A C T G C G T A C T A G C G A T A G T C G T C A C G T A C G A T C T G A A G T C C T G A C G T A C G T A C G T A C G T A A C T G
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T