Information for 8-CAAGGGAGCCGCTCCA (Motif 17)

A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
Reverse Opposite:
A C G T A C T G A T C G T C G A T A C G G A T C C T A G T A C G A G T C A G C T T A G C A G T C G T A C C G A T A C G T A T C G
p-value:1e-9
log p-value:-2.121e+01
Information Content per bp:1.700
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif72.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets46.8 +/- 25.4bp
Average Position of motif in Background52.4 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CAAGGGAGCCGCTCCA
---CGGAGC-------
 A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CAAGGGAGCCGCTCCA-
------AGCCACTCAAG
 A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGGAGCCGCTCCA
NTNNNAGGAGTCTCNTN-
 A C G T A C G T A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CAAGGGAGCCGCTCCA
TCCCNNGGGACN-------
 A C G T A C G T A C G T A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGGAGCCGCTCCA
ACAAAGGNBCCT-----
 A C G T A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGGAGCCGCTCCA
ATTCCCAAGGGAAT-------
 A C G T A C G T A C G T A C G T A C G T A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGAGCCGCTCCA
ANCAGGAAGT-------
 A C G T A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGAGCCGCTCCA
AVCAGGAAGT-------
 A C G T A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAAGGGAGCCGCTCCA
-ADGGYAGYAGCATCT
 A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGGAGCCGCTCCA
NNNAAGGGGGCGGGNNN-
 A C G T A C G T A T G C G T C A G C T A A C T G A C T G A C T G C T G A C T A G A G T C A G T C C A T G A T G C A G C T A T G C G T A C G T C A
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T