Information for 11-CGTAATACCC (Motif 16)

A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T C T G A A G C T A C G T C G T A A G T C C T A G
p-value:1e-9
log p-value:-2.170e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 34.1bp
Average Position of motif in Background58.2 +/- 37.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CGTAATACCC----
ANANGTGATACCCCATT
 A C G T A C G T A C G T A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CGTAATACCC----
ANANNTGATACCCNATN
 A C G T A C G T A C G T A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CGTAATACCC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CGTAATACCC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CGTAATACCC----
ANNNATGATACCCCATC
 A C G T A C G T A C G T A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGTAATACCC----
ANANNTGATACCCTATN
 A C G T A C G T A C G T A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGTAATACCC----
AATNTTGATACCCTATN
 A C G T A C G T A C G T A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGTAATACCC
--TAATCCCN
 A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGTAATACCC
CCTAATCCGC
 A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTAATACCC
GCTAATCCCC
 A G T C C T A G A C G T C G T A C T G A A G C T C G T A A G T C A G T C A G T C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C