Information for 8-CAGCACAGCG (Motif 13)

A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G
Reverse Opposite:
G T A C C T A G G T A C A G C T A T C G A G C T A C T G A G T C G A C T A T C G
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.827
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif216.0
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets64.6 +/- 19.2bp
Average Position of motif in Background49.2 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAGCACAGCG
---CACAGN-
 A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGCACAGCG
AAACCACAGC-
 A C G T A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGCACAGCG-----
GAGCACAGCAGGACA
 A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGCACAGCG
GTCAGCANNTN-
 A C G T A C G T A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCACAGCG
TGAGTCAGCA-----
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGCACAGCG
CCAGGAACAG--
 A C G T A C G T A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGCACAGCG-----
CCACACAGCAGGAGA
 A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G A C G T A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCACAGCG
NWAACCACADNN
 A C G T A C G T A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAGCACAGCG
CTGAGTCAGCAATTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGCACAGCG
CAGCC-----
 A T G C C T G A C T A G A G T C C T G A A T G C T C G A C A T G G A T C A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T