Information for 9-AAGGCCAGGTTGC (Motif 9)

G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A T C G A A G T C G A T C A G C T A C T G A C T G A G T C A G T C A G C T A C G T
p-value:1e-9
log p-value:-2.263e+01
Information Content per bp:1.805
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.9 +/- 23.6bp
Average Position of motif in Background65.3 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGGCCAGGTTGC
CAAGGHCANV----
 A C G T G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGGCCAGGTTGC
-AGGCCTNG----
 G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGCCAGGTTGC
-AGGCCTAG----
 G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAGGCCAGGTTGC-
CAGGCCNNGGCCNN
 G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AAGGCCAGGTTGC
AAGTTCAAGGTCAGC----
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCAGGTTGC
NTCAAGGTCA------
 A C G T A C G T A C G T G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGGCCAGGTTGC
AAGGCAAGTGT--
 G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGGCCAGGTTGC
CAAAGGTCAG-----
 A C G T A C G T G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCAGGTTGC
BTCAAGGTCA------
 A C G T A C G T A C G T G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGGCCAGGTTGC
AAGGTCAC-----
 G T C A C T G A A C T G T C A G A G T C G T A C C T G A C T A G A C T G A C G T C G A T A C T G A T G C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T