Information for 8-GAGAGACRTCCMGKGA (Motif 9)

A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A
Reverse Opposite:
A G C T A G T C T G A C A G T C A C T G A C T G A C T G G T C A G A T C A C T G G A C T A G T C A C G T G T A C A C G T A G T C
p-value:1e-12
log p-value:-2.966e+01
Information Content per bp:1.716
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.1 +/- 22.4bp
Average Position of motif in Background68.4 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GAGAGACRTCCMGKGA-
-------GTCACGTGAT
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GAGAGACRTCCMGKGA-
-------GTCACGTGAT
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T

MLX/MA0663.1/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GAGAGACRTCCMGKGA-
-------ATCACGTGAT
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GAGAGACRTCCMGKGA---
-------GTCACGTGACYV
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GAGAGACRTCCMGKGA-
-------GTCACGTGNT
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

BHLHE41/MA0636.1/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GAGAGACRTCCMGKGA-
-------GTCACGTGAC
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GAGAGACRTCCMGKGA-
-------GTCACGTGAT
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GAGAGACRTCCMGKGA
------GGTCACGTGG
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGAGACRTCCMGKGA-------
-GGAAGAGTCACGTGACCAATAC
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

MLXIPL/MA0664.1/Jaspar

Match Rank:10
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GAGAGACRTCCMGKGA-
-------ATCACGTGAT
 A C T G G T C A A C T G T G C A T C A G C T G A G T A C C T A G A C G T A G T C G T A C T G A C A C T G A C T G C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T