Information for 3-AGATCACGTG (Motif 8)

C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G
Reverse Opposite:
G T A C C T G A T G A C T A C G G C A T A T C G C T G A A G C T A G T C G A C T
p-value:1e-13
log p-value:-3.045e+01
Information Content per bp:1.673
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.43%
Number of Background Sequences with motif383.5
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets50.4 +/- 23.5bp
Average Position of motif in Background49.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.87
Offset:1
Orientation:forward strand
Alignment:AGATCACGTG-
-GGTCACGTGG
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G A C G T
A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

MLX/MA0663.1/Jaspar

Match Rank:2
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:AGATCACGTG--
--ATCACGTGAT
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G A C G T A C G T
A C G T A C G T C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T

MLXIPL/MA0664.1/Jaspar

Match Rank:3
Score:0.85
Offset:2
Orientation:forward strand
Alignment:AGATCACGTG--
--ATCACGTGAT
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G A C G T A C G T
A C G T A C G T C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.84
Offset:1
Orientation:forward strand
Alignment:AGATCACGTG-
-GGTCACGTGC
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G A C G T
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.83
Offset:2
Orientation:forward strand
Alignment:AGATCACGTG--
--GTCACGTGGT
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G A C G T A C G T
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:6
Score:0.83
Offset:2
Orientation:forward strand
Alignment:AGATCACGTG--
--ATCACGTGAC
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G A C G T A C G T
A C G T A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:7
Score:0.83
Offset:2
Orientation:forward strand
Alignment:AGATCACGTG
--ACCACGTG
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G
A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.83
Offset:1
Orientation:forward strand
Alignment:AGATCACGTG-
-GGTCACGTGA
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G A C G T
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:AGATCACGTG--
--GTCACGTGNT
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G A C G T A C G T
A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:10
Score:0.83
Offset:2
Orientation:forward strand
Alignment:AGATCACGTG--
--ATCACGTGAC
 C T G A T C A G T C G A G A C T A T G C C G T A A T G C A C T G G A C T C A T G A C G T A C G T
A C G T A C G T T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C