Information for 7-GCCTCTGSCCTAGACT (Motif 7)

C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T
Reverse Opposite:
C T G A C T A G A C G T A G T C C G A T C G T A C T A G A C T G A T G C G T A C C G T A T A C G C G T A C T A G A T C G A G T C
p-value:1e-13
log p-value:-3.154e+01
Information Content per bp:1.793
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.7 +/- 16.2bp
Average Position of motif in Background31.3 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GCCTCTGSCCTAGACT
-----TGACCTTGAN-
 C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GCCTCTGSCCTAGACT
-----TGACCTTGAV-
 C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GCCTCTGSCCTAGACT-
-----TGACCTTGACCT
 C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCTGSCCTAGACT
TGACCTTTGCCCTAN---
 A C G T A C G T C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCTGSCCTAGACT
TGACCTTTGCCCTA----
 A C G T A C G T C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCCTCTGSCCTAGACT--
---GCTGACCTTGAACTN
 C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T A C G T A C G T
A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCCTCTGSCCTAGACT
---BNTGDCCTTG---
 C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCTCTGSCCTAGACT
---NATGACCTTGA--
 C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T
A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCCTCTGSCCTAGACT-
-----TGACCTTGACCT
 C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCTCTGSCCTAGACT
TGACCTTTGCCCCA----
 A C G T A C G T C T A G A T G C A G T C C G A T A G T C A C G T A C T G A T C G A G T C A G T C A C G T C G T A A C T G T C G A A G T C A G C T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T A C G T A C G T