Information for 23-CCATGAHCATGGD (Motif 42)

G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
Reverse Opposite:
G C A T G T A C A G T C C T G A A C G T A C T G C G T A C G A T A G T C C G T A A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.852
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.0 +/- 7.9bp
Average Position of motif in Background50.8 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCATGAHCATGGD
-CATGAC------
 G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCATGAHCATGGD--
NNNNATGACCTTGANTN
 A C G T A C G T G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCATGAHCATGGD
--ATGACCTTGAA
 G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCATGAHCATGGD
TGACCTTGACCT----
 A C G T A C G T A C G T G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCATGAHCATGGD
NCGTGACN-----
 G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCATGAHCATGGD
GGCCATTAAC-----
 A C G T A C G T G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCATGAHCATGGD
TGACCTTGACCT----
 A C G T A C G T A C G T G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCATGAHCATGGD
-NATGACCTTGA-
 G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCATGAHCATGGD
--ATGACCTTGA-
 G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCATGAHCATGGD
CCAGGAACAG---
 G T A C A G T C C G T A A C G T A C T G C G T A G A C T A G T C C G T A A G C T A C T G A C T G C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T