Information for 21-TGGGTCATTCCCA (Motif 37)

A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G A C T G G T C A C G T A A C G T A C T G C T G A A G T C A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 27.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGGTCATTCCCA
NGGGGATTTCCC-
 A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGGGTCATTCCCA
-GGGGATTTCC--
 A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGGGTCATTCCCA--
-----HTTTCCCASG
 A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGGTCATTCCCA
TGAGTCATTTC--
 A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGGTCATTCCCA
-GGGGATTTCC--
 A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTCATTCCCA
ATGAGTCAT-----
 A C G T A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTCATTCCCA
ATGAGTCATNTNNT
 A C G T A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGGGTCATTCCCA
-AGGTCA------
 A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGGTCATTCCCA
GATGAGTCATN----
 A C G T A C G T A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGGGTCATTCCCA
--GGAAATTCCC-
 A C G T A C T G A C T G C T A G A G C T A G T C C G T A A C G T A C G T A G T C A T G C A G T C C G T A
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T