Information for 14-CAGGTCACTGCCAAGG (Motif 25)

A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C C G A T A G C T A C T G A C T G T A G C G T C A A T C G C G A T A C T G T C G A A T G C A G T C C G A T A T C G
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.658
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif56.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets64.2 +/- 20.9bp
Average Position of motif in Background50.6 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGGTCACTGCCAAGG
NAGGTCANTGACCT--
 A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAGGTCACTGCCAAGG---
----TCCCAGMCRAGCCCC
 A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGGTCACTGCCAAGG
-AGGTCAAGGTCA---
 A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGTCACTGCCAAGG
-AGGTCA---------
 A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGGTCACTGCCAAGG
AAGGTCAC--------
 A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGGTCACTGCCAAGG
TRAGGTCA---------
 A C G T A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGGTCACTGCCAAGG
--GGCCACRCCCMK--
 A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAGGTCACTGCCAAGG
--AGTCACGC------
 A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGGTCACTGCCAAGG
-AGGTCAAGGTCA---
 A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTCACTGCCAAGG
CGCGCCGGGTCACGTA-----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A T C A G A T C G A G C T G T A C G C T A T A G C C A G T A T C G T G A C T A G C C T G A C G T A A C T G C T A G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T A C G T