Information for 13-AGACACATCGCGC (Motif 22)

C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C
Reverse Opposite:
A T C G A T G C C A T G A G T C C T A G T G C A A C G T A C T G G A C T A T C G A G C T A G T C A G C T
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.674
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif128.7
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets50.9 +/- 29.5bp
Average Position of motif in Background58.2 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AGACACATCGCGC-
------AGCGCGCC
 C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGACACATCGCGC---
--NNGCNCTGCGCGGC
 C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGACACATCGCGC------
----NTCGCGCGCCTTNNN
 C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGACACATCGCGC------
----ANCGCGCGCCCTTNN
 C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGACACATCGCGC-
----DTTTCCCGCC
 C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C A C G T
A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

PB0131.1_Gmeb1_2/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGACACATCGCGC-
TNAACGACGTCGNCCA
 A C G T A C G T C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGACACATCGCGC--
----NNTTCCCGCCC
 C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGACACATCGCGC
GARTGGTCATCGCCC
 A C G T A C G T C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AGACACATCGCGC
--DCTCAGCAGG-
 C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGACACATCGCGC--
GAGCACAGCAGGACA
 C T G A C T A G T C G A T A G C C G T A A G T C T G C A A C G T A G T C T A C G G T A C A T C G A T G C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A