Information for 12-CTTCTGCATGTTG (Motif 20)

A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G
Reverse Opposite:
A G T C G T C A G T C A A G T C C G T A A C G T A C T G A T G C C G T A A T C G G T C A C G T A A C T G
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.841
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.3 +/- 18.6bp
Average Position of motif in Background51.2 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTTCTGCATGTTG
TTCATTTGCATAT--
 A C G T A C G T A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTGCATGTTG---
ANTNNTACATGTANNTN
 A C G T A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTGCATGTTG
BTVATTWGCATA---
 A C G T A C G T A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTGCATGTTG
CTCATTTGCATW---
 A C G T A C G T A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTGCATGTTG---
NNTTTTACATGTANNNT
 A C G T A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTCTGCATGTTG
-ATTTGCATAT--
 A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTTCTGCATGTTG-
--ACAGGATGTGGT
 A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G A C G T
A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTTCTGCATGTTG
-ATTTGCATAA--
 A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTTCTGCATGTTG
----TGCGTG---
 A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G
A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTTCTGCATGTTG-
------CACGTGGC
 A G T C C G A T A C G T A T G C C G A T A T C G A G T C C G T A A C G T A C T G C A G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C