Information for 12-GGCCAVGTGATKCTCH (Motif 19)

A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
Reverse Opposite:
C A G T A T C G C T G A A T C G G T C A T C G A A C G T A G T C C G T A G T A C A C T G C A G T A C T G A T C G A T G C T A G C
p-value:1e-10
log p-value:-2.485e+01
Information Content per bp:1.699
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.8 +/- 21.6bp
Average Position of motif in Background45.2 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGCCAVGTGATKCTCH
-KCCACGTGAC-----
 A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGCCAVGTGATKCTCH
GGTCACGTGA------
 A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCCAVGTGATKCTCH
-ACCACGTGAC-----
 A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCCAVGTGATKCTCH
-GCCACGTGACC----
 A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCCAVGTGATKCTCH
-GTCATGTGACC----
 A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCCAVGTGATKCTCH
-GCCACGTG-------
 A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGCCAVGTGATKCTCH
--NCACGTGACN----
 A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCCAVGTGATKCTCH
CCGGTCACGTGA------
 A C G T A C G T A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGCCAVGTGATKCTCH
-GCCACGTGT------
 A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCCAVGTGATKCTCH
--CCATGTGCTT----
 A C T G A T C G A T G C G T A C G C T A T A G C C A T G A C G T C T A G G T C A A G C T A C G T A T G C A G C T T A G C G T C A
A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T A C G T