Information for 9-RMCGTCASACRCA (Motif 16)

C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C A C T G A C G T A T C G A C G T A C T G C G T A A G T C A C T G A C G T A G C T
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.5 +/- 20.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:RMCGTCASACRCA
-ACGTCA------
 C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A
A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RMCGTCASACRCA
TGACGTCA------
 A C G T C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RMCGTCASACRCA
TACGTCAT-----
 C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RMCGTCASACRCA
---GCCACACCCA
 C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A
A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

Crem/MA0609.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-RMCGTCASACRCA
TTACGTCATN----
 A C G T C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A
A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A A C G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----RMCGTCASACRCA
CGGTGACGTCAC-----
 A C G T A C G T A C G T A C G T C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RMCGTCASACRCA---
AGCGGCACACACGCAA
 C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----RMCGTCASACRCA
NCGATGACGTCATCGN--
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A
G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:RMCGTCASACRCA-
----TBGCACGCAA
 C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:RMCGTCASACRCA
----TCACACCT-
 C T G A G T C A A G T C A C T G A C G T A G T C C G T A A T G C C G T A A G T C C T A G A G T C C G T A
A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T