Information for 6-TGSMCCMTGCCAT (Motif 12)

A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T
Reverse Opposite:
C G T A A C G T A T C G A C T G A G T C C G T A C A T G C A T G C T A G A C T G T A G C A G T C C G T A
p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.736
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif74.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets47.0 +/- 23.6bp
Average Position of motif in Background53.1 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGSMCCMTGCCAT-
TGACCTTTGCCCTA
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGSMCCMTGCCAT
CGCCCCCTGACA-
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGSMCCMTGCCAT
TGGCACGTGCCA-
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGSMCCMTGCCAT---
TGGACTTTGNNCTNTG
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGSMCCMTGCCAT-
TGACCTTTGACCTC
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGSMCCMTGCCAT--
TGACCTTTGCCCTAN
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGSMCCMTGCCAT--
TGACCTCTGACCCCN
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGSMCCMTGCCAT--
TGGACTTTGNNCTCN
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PKNOX2/MA0783.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGSMCCMTGCCAT
TGACACCTGTCA-
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGSMCCMTGCCAT
CGGCACGTGCCA-
 A C G T A C T G A T C G G T A C A G T C G T A C G T A C C G A T A C T G G T A C A T G C G T C A A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T